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Episode 14 - Blowback 3/7/2004 Edit details Sydney and Vaughn run into trouble trying to collect a special weapon. Lauren and Sark continue that dastardly deeds for the Covenant. Marshall's new fatherhood is making him babble like a baby.

Episode 13 - After Six 2/15/2004 Edit details Sydney and Vaughn are sent to collect the Doleac Agenda but have to defeat several security traps. Sark and Lauren start taking out the Six Cell leaders to get to the top, but Sark runs into rouge agent McKennis Cole and his secret partner. Cole reveals he knows a more than he should about Vaughn and Sydney.

Episode 12 - Crossings 1/18/2004 Edit details .

Episode 11 - Full Disclosure 1/11/2004 Edit details Sydney complains about the Rimbaldi cube being removed and is then kidnapped. On a plane, she is reacquanted with FBI Officer Kendall who reveals the shocking truth of her lost memory of the last two years.

Episode 10 - Remnants 12/7/2003 Edit details Sydney sees Will in her final dream sequence and a mysterious St. Aiden. Sydney has to pull Will out of witness protection to find they are blocked by Allison. Sark finds a relative to tell him where Sydney and Will have gone. Lindsey has a run in with Sloane.

Episode 9 - Conscious 11/30/2003 Edit details .Sydney undergoes a memory recovery treatment at the hands of a bizarre researcher. During the sessions she meets people she knows who reveal her deepest secrets.

Episode 8 - Breaking Point 11/23/2003 Edit details .

Episode 7 - Prelude 11/9/2003 Edit details .

Episode 6 - The Nemesis 11/2/2003 Edit details .

Episode 5 - Repercussions 10/26/2003 Edit details .

Episode 4 - A Missing Link 10/19/2003 Edit details .

Episode 3 - Reunion 10/12/2003 Edit details .

Episode 2 - Succession 10/5/2003 Edit details .

Episode 1 - The Two 9/28/2003 Edit details .

Season 2

Episode 22 - The Telling 5/4/2003 Edit details .

Episode 21 - Second Double 5/4/2003 Edit details .

Episode 20 - Countdown 4/27/2003 Edit details .